PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS70519.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family MYB_related
Protein Properties Length: 134aa    MW: 14942.9 Da    PI: 8.1902
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS70519.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.53.1e-0878122243
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksr 43 
                        W++ Ed+ l++a k ++++    +W++Ia  +  g+t  +c+ r
       EPS70519.1  78 VEWSPGEDLALLNALKAFPKNttplRWEKIAGSVT-GKTKSDCIKR 122
                      68********************************9.*******987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.5E-871129IPR009057Homeodomain-like
PROSITE profilePS500906.57472122IPR017877Myb-like domain
SMARTSM007171.6E-776129IPR001005SANT/Myb domain
SuperFamilySSF466891.09E-877125IPR009057Homeodomain-like
PfamPF002498.0E-777122IPR001005SANT/Myb domain
CDDcd001678.08E-679122No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048767Biological Processroot hair elongation
GO:0005783Cellular Componentendoplasmic reticulum
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
GKPGRWEEDI ARCLDGDSEV GTVIEKAKEL GVKKSRDEED SYDKFLKQRK SIDSGMLRKT  60
NGDGDALDEE EEAKKGKVEW SPGEDLALLN ALKAFPKNTT PLRWEKIAGS VTGKTKSDCI  120
KRVAELKKDF RSAK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082375.14e-36PREDICTED: dnaJ homolog subfamily C member 2-like
RefseqXP_011082376.14e-36PREDICTED: dnaJ homolog subfamily C member 2-like
TrEMBLS8CTC43e-91S8CTC4_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc08g077290.1.13e-33(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA126681011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.11e-30MYB_related family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]